DRSC/TRiP Functional Genomics Resources

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Protein Alignment btn and Hoxa7

DIOPT Version :10

Sequence 1:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_001102703.2 Gene:Hoxa7 / 500126 RGDID:1587253 Length:229 Species:Rattus norvegicus


Alignment Length:147 Identity:53/147 - (36%)
Similarity:75/147 - (51%) Gaps:25/147 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YTDCSYVYDHSASSSY-----------ADYNK--------LETNWCNEANDQWLQNEAPTGQEL- 73
            |...|.:|.:..:|||           |.|::        |....|::|::..|...|.....: 
  Rat    55 YNVNSPLYQNPFASSYGLGADAYNLPCASYDQNIPGLCSDLAKGACDKADEGVLHGPAEASFRIY 119

  Fly    74 PSQRSKLRAISSNRKE-RTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAVALELTERQVKVWFQNR 137
            |..||.    ..:||. |..:::.|..:||.||.::.||||.||.|||.||.|||||:|:|||||
  Rat   120 PWMRSS----GPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 180

  Fly   138 RMKCKRIKLEEQQGSSA 154
            |||.|:...:|.|..:|
  Rat   181 RMKWKKEHKDESQAPTA 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btnNP_732768.1 Homeodomain 87..143 CDD:459649 33/56 (59%)
Hoxa7NP_001102703.2 Homeodomain 130..186 CDD:459649 32/55 (58%)

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