DRSC/TRiP Functional Genomics Resources

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Protein Alignment btn and gsx1

DIOPT Version :9

Sequence 1:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_001012251.1 Gene:gsx1 / 449875 ZFINID:ZDB-GENE-041008-135 Length:243 Species:Danio rerio


Alignment Length:129 Identity:47/129 - (36%)
Similarity:68/129 - (52%) Gaps:26/129 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 ADYNKLETNWCNEANDQWLQNEAPTGQELPSQRSKLRA---------------------ISSNRK 88
            |.:....|.:|:.|..:  |:...:|..|.|.....:|                     :.|:::
Zfish    76 ASFPAFGTQYCHSALSR--QHSTSSGVNLNSGSGLYQAAYPVPDPRQFHCISIENSSSQLQSSKR 138

  Fly    89 ERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAVALELTERQVKVWFQNRRMKCKRIKLEEQQGS 152
            .||||:.|||.:||.||..:.||:||||.|||..|.|:|:|||:||||||:|.|:   |.:.||
Zfish   139 MRTAFTSTQLLELEREFTSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKK---EGKSGS 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btnNP_732768.1 Homeobox 90..142 CDD:278475 33/51 (65%)
gsx1NP_001012251.1 Homeobox 140..192 CDD:278475 33/51 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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