DRSC/TRiP Functional Genomics Resources

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Protein Alignment btn and CG4328

DIOPT Version :10

Sequence 1:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_648567.2 Gene:CG4328 / 39405 FlyBaseID:FBgn0036274 Length:544 Species:Drosophila melanogaster


Alignment Length:100 Identity:32/100 - (32%)
Similarity:47/100 - (47%) Gaps:4/100 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 EANDQWLQNEAPTGQEL-PSQRSKLRAISSNRKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIA 120
            |...:.||.....|.|| |   .||......::.||..:..|.:..:|.|..|....|..|..:|
  Fly   314 EKEVEMLQGYDFYGDELFP---PKLDGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRKVRENLA 375

  Fly   121 VALELTERQVKVWFQNRRMKCKRIKLEEQQGSSAK 155
            ....|:.|.|:|||||:|.|.|:|:.:.:|...:|
  Fly   376 KDTGLSLRIVQVWFQNQRAKVKKIQKKAKQEPPSK 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btnNP_732768.1 Homeodomain 87..143 CDD:459649 19/55 (35%)
CG4328NP_648567.2 LIM1_Lmx1b 199..251 CDD:188757
LIM 259..313 CDD:413332
COG5576 <332..439 CDD:227863 25/81 (31%)
HOX 341..393 CDD:197696 17/51 (33%)
Blue background indicates that the domain is not in the aligned region.

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