DRSC/TRiP Functional Genomics Resources

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Protein Alignment btn and cad

DIOPT Version :10

Sequence 1:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster


Alignment Length:108 Identity:38/108 - (35%)
Similarity:50/108 - (46%) Gaps:18/108 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 WLQNEAPTGQELPSQRSK---------LRAISSNR---KERTAFSKTQLKQLEAEFCYSNYLTRL 114
            |::..|...|..|...|.         |.|....|   |.|..::..|..:||.|:|.|.|:|..
  Fly   255 WMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIR 319

  Fly   115 RRYEIAVALELTERQVKVWFQNRRMKCKRIKLEEQQGSSAKTP 157
            |:.|:|..|.|:|||||:||||||.|      |.:|......|
  Fly   320 RKSELAQTLSLSERQVKIWFQNRRAK------ERKQNKKGSDP 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btnNP_732768.1 Homeodomain 87..143 CDD:459649 28/58 (48%)
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 28/60 (47%)

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