DRSC/TRiP Functional Genomics Resources

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Protein Alignment btn and nkx3-2

DIOPT Version :10

Sequence 1:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster
Sequence 2:XP_073777336.1 Gene:nkx3-2 / 337865 ZFINID:ZDB-GENE-030127-1 Length:255 Species:Danio rerio


Alignment Length:162 Identity:48/162 - (29%)
Similarity:70/162 - (43%) Gaps:35/162 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KNSHANVYQESYCYEDITKSWLNQTEGYTDCSYVYD---------HSASSSYADYNKLETNWCNE 57
            :..|.|...:|...||      |..:...|.....|         .||:...:|.    .:.||.
Zfish    63 ETEHKNYDSDSGLSED------NDAKAQIDAKPEKDADLADETDQESAAKGLSDC----VSDCNT 117

  Fly    58 ANDQWLQNEAPTGQELPSQRSKLRAISSNRKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAVA 122
            |.::        ..:.|.||.|        :.|.|||..|:.:||..|.:..||:...|.::|.:
Zfish   118 AEEK--------SGDAPKQRKK--------RSRAAFSHAQVFELERRFNHQRYLSGPERADLAAS 166

  Fly   123 LELTERQVKVWFQNRRMKCKRIKLEEQQGSSA 154
            |:|||.|||:||||||.|.||.::.....:||
Zfish   167 LKLTETQVKIWFQNRRYKTKRRQMAADLLASA 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btnNP_732768.1 Homeodomain 87..143 CDD:459649 26/55 (47%)
nkx3-2XP_073777336.1 None

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