DRSC/TRiP Functional Genomics Resources

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Protein Alignment btn and Vsx1

DIOPT Version :10

Sequence 1:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_572232.2 Gene:Vsx1 / 31470 FlyBaseID:FBgn0263511 Length:837 Species:Drosophila melanogaster


Alignment Length:82 Identity:27/82 - (32%)
Similarity:44/82 - (53%) Gaps:6/82 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 PSQRSKLRAISSNRKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAVALELTERQVKVWFQNRR 138
            |..:.|    :..|..||.|:.:||::||..|..::|.....|..:::...|.|.:::||:||||
  Fly   387 PGGKKK----NKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRR 447

  Fly   139 MKCKRIKLEEQQGSSAK 155
            .|.:  |.|:..|.|.|
  Fly   448 AKWR--KTEKCWGHSTK 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btnNP_732768.1 Homeodomain 87..143 CDD:459649 20/55 (36%)
Vsx1NP_572232.2 Homeodomain 395..452 CDD:459649 20/58 (34%)

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