DRSC/TRiP Functional Genomics Resources

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Protein Alignment btn and pdx1

DIOPT Version :9

Sequence 1:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_571518.2 Gene:pdx1 / 30721 ZFINID:ZDB-GENE-990415-122 Length:246 Species:Danio rerio


Alignment Length:139 Identity:43/139 - (30%)
Similarity:67/139 - (48%) Gaps:45/139 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 WLNQTEGYTDCSYVYDHSASSSYADYNKLETNWCNEANDQWLQNEAPTGQELPSQRSKLRAISSN 86
            |:..|:.:|       |:              |    ..||      ||..:..       ...|
Zfish   111 WMKSTKSHT-------HA--------------W----KGQW------TGPYMVE-------AEEN 137

  Fly    87 RKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAVALELTERQVKVWFQNRRMKCKRIK------ 145
            ::.|||:::.||.:||.||.::.|::|.||.|:|:.|.||||.:|:||||||||.|:.:      
Zfish   138 KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELALTLSLTERHIKIWFQNRRMKWKKEEDKRRAR 202

  Fly   146 -LEEQQGSS 153
             ::.:|.||
Zfish   203 GVDPEQDSS 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btnNP_732768.1 Homeobox 90..142 CDD:278475 29/51 (57%)
pdx1NP_571518.2 Homeobox 140..193 CDD:278475 29/52 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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