DRSC/TRiP Functional Genomics Resources

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Protein Alignment btn and nkx2.2a

DIOPT Version :10

Sequence 1:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_571497.2 Gene:nkx2.2a / 30697 ZFINID:ZDB-GENE-980526-403 Length:273 Species:Danio rerio


Alignment Length:127 Identity:40/127 - (31%)
Similarity:58/127 - (45%) Gaps:18/127 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 YDHS--------ASSSYADY--NKLETNWCNEANDQWLQNEAPTGQELPSQRSKLRAISSN---- 86
            ||:|        |::....|  :.|..|    :.|...::..|:..|.|....:..:..|:    
Zfish    69 YDNSDNPYTRWLATTDSIQYSLHGLSAN----SQDTSAKSPEPSADESPDNDKETSSNGSDSGKK 129

  Fly    87 RKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAVALELTERQVKVWFQNRRMKCKRIKLEE 148
            ||.|..|||.|..:||..|....||:...|..:|..:.||..|||:||||.|.|.||.:.|:
Zfish   130 RKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKRARAEK 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btnNP_732768.1 Homeodomain 87..143 CDD:459649 25/55 (45%)
nkx2.2aNP_571497.2 COG5576 93..218 CDD:227863 35/103 (34%)
Homeodomain 130..186 CDD:459649 25/55 (45%)

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