DRSC/TRiP Functional Genomics Resources

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Protein Alignment btn and hoxd11a

DIOPT Version :10

Sequence 1:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_571242.1 Gene:hoxd11a / 30405 ZFINID:ZDB-GENE-990415-117 Length:276 Species:Danio rerio


Alignment Length:197 Identity:50/197 - (25%)
Similarity:90/197 - (45%) Gaps:49/197 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KNSHANVYQ-ESYCYEDITKSWLNQTEGYTDCSYVYDHSA--SSSYADYNKLETNW--------- 54
            :.::|:.|. |...:.|:.:| .|:.|.......:|.|.|  :||.:.:..:..|.         
Zfish    73 RGNYASYYSTEEIMHRDLLQS-TNRAEMIFKNDSMYSHHAGTNSSCSFFTNVGRNGVLPQGFDQF 136

  Fly    55 ---------------------------CNEAND---QWLQNEAPTGQELPS------QRSKLRAI 83
                                       ||.:.|   |..|:...|.:|..|      :::...:.
Zfish   137 FETANSEKPNPEQSKQKPDTSVPGDAACNPSTDSAEQTKQDPTDTVEEESSVSTCDEEKNSGSSA 201

  Fly    84 SSNRKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAVALELTERQVKVWFQNRRMKCKRIKLEE 148
            :.:||:|..:||.|:::||.||.::.|:.:.:|.:::..|.||:||||:||||||||.|::..:.
Zfish   202 TKSRKKRCPYSKYQIRELEREFFFNVYINKEKRLQLSRMLSLTDRQVKIWFQNRRMKEKKLNRDR 266

  Fly   149 QQ 150
            .|
Zfish   267 LQ 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btnNP_732768.1 Homeodomain 87..143 CDD:459649 27/55 (49%)
hoxd11aNP_571242.1 DUF3528 23..144 CDD:432284 13/71 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 139..207 9/67 (13%)
Homeodomain 205..261 CDD:459649 27/55 (49%)

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