DRSC/TRiP Functional Genomics Resources

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Protein Alignment btn and hoxc4a

DIOPT Version :9

Sequence 1:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_571197.1 Gene:hoxc4a / 30345 ZFINID:ZDB-GENE-990415-112 Length:268 Species:Danio rerio


Alignment Length:114 Identity:43/114 - (37%)
Similarity:67/114 - (58%) Gaps:19/114 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SASSSYADYNKLETNWCNEANDQWLQNEAPTGQELP---SQRSKLRAISSN------RKERTAFS 94
            ||:||.          ||:|..:...:.|...|.:.   .::..:..::|:      ::.|||::
Zfish   108 SAASSA----------CNQATPEHPNSSASAKQPVVYPWMKKIHVSTVNSSYNGAEPKRSRTAYT 162

  Fly    95 KTQLKQLEAEFCYSNYLTRLRRYEIAVALELTERQVKVWFQNRRMKCKR 143
            :.|:.:||.||.|:.||||.||.|||.:|.|:|||:|:||||||||.|:
Zfish   163 RQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKK 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btnNP_732768.1 Homeobox 90..142 CDD:278475 32/51 (63%)
hoxc4aNP_571197.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 70..129 8/30 (27%)
Antp-type hexapeptide 133..138 0/4 (0%)
Homeobox 157..210 CDD:278475 32/52 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..268 43/114 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.810

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