DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment btn and hoxb8a

DIOPT Version :10

Sequence 1:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster
Sequence 2:XP_005171620.1 Gene:hoxb8a / 30343 ZFINID:ZDB-GENE-990415-108 Length:246 Species:Danio rerio


Alignment Length:163 Identity:55/163 - (33%)
Similarity:79/163 - (48%) Gaps:37/163 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YQESYC-------------YEDITKSWLNQTEG-----YTDCSYVYDHSASSSYADYNKLETNWC 55
            ||:|.|             |:.:.:..|...:.     |:||                ||.|...
Zfish    70 YQQSPCAVTCHGEPGNFYGYDALQRQTLFGAQDADLVQYSDC----------------KLATGGI 118

  Fly    56 NEANDQWLQNEAPTGQELPSQRSKLRAISSNRKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIA 120
            .:..|...|:.:|| |..|..|.::.|  ..|:.|..:|:.|..:||.||.::.||||.||.|::
Zfish   119 GDETDNTEQSPSPT-QLFPWMRPQVAA--GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVS 180

  Fly   121 VALELTERQVKVWFQNRRMKCKRIKLEEQQGSS 153
            .||.|||||||:||||||||.|:...:::..||
Zfish   181 HALGLTERQVKIWFQNRRMKWKKENNKDKFPSS 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btnNP_732768.1 Homeodomain 87..143 CDD:459649 32/55 (58%)
hoxb8aXP_005171620.1 Homeodomain 147..203 CDD:459649 32/55 (58%)

Return to query results.
Submit another query.