DRSC/TRiP Functional Genomics Resources

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Protein Alignment btn and Gbx1

DIOPT Version :10

Sequence 1:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_001258382.1 Gene:Gbx1 / 246149 RGDID:621864 Length:425 Species:Rattus norvegicus


Alignment Length:92 Identity:40/92 - (43%)
Similarity:52/92 - (56%) Gaps:11/92 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 TGQELPSQRSKLRAISSNRKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAVALELTERQVKVW 133
            ||...|..:|        |:.||||:..||.:||.||....||:...|.:||.||:|:|.|||:|
  Rat   314 TGVTTPGGKS--------RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIW 370

  Fly   134 FQNRRMKCKRIK---LEEQQGSSAKTP 157
            |||||.|.||||   :..:.|...:.|
  Rat   371 FQNRRAKWKRIKAGNVSSRSGEPVRNP 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btnNP_732768.1 Homeodomain 87..143 CDD:459649 30/55 (55%)
Gbx1NP_001258382.1 Homeodomain 324..380 CDD:459649 30/55 (55%)

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