DRSC/TRiP Functional Genomics Resources

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Protein Alignment btn and Hoxa4

DIOPT Version :9

Sequence 1:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_032291.1 Gene:Hoxa4 / 15401 MGIID:96176 Length:285 Species:Mus musculus


Alignment Length:100 Identity:43/100 - (43%)
Similarity:64/100 - (64%) Gaps:11/100 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 PTGQE---LP-SQRSKLRAISSN------RKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAVA 122
            |.|:|   .| .::..:.|::|:      ::.|||:::.|:.:||.||.::.||||.||.|||..
Mouse   152 PKGKEPVVYPWMKKIHVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 216

  Fly   123 LELTERQVKVWFQNRRMKCKR-IKLEEQQGSSAKT 156
            |.|:|||||:||||||||.|: .||...:..|:.|
Mouse   217 LCLSERQVKIWFQNRRMKWKKDHKLPNTKMRSSNT 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btnNP_732768.1 Homeobox 90..142 CDD:278475 32/51 (63%)
Hoxa4NP_032291.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..70
Antp-type hexapeptide 159..164 1/4 (25%)
Homeobox 183..236 CDD:278475 32/52 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..285 3/13 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.900

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