DRSC/TRiP Functional Genomics Resources

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Protein Alignment btn and hoxa4

DIOPT Version :10

Sequence 1:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster
Sequence 2:XP_004915454.1 Gene:hoxa4 / 101734089 XenbaseID:XB-GENE-486676 Length:251 Species:Xenopus tropicalis


Alignment Length:67 Identity:19/67 - (28%)
Similarity:27/67 - (40%) Gaps:24/67 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 PDSAVATKLARQLVERKLVACVNIIPGLTSIYS-W-EDKINED-------PEV-----LMMLKTR 105
            |.:.:..:..||.|.|:        |..|  || | |:||.:|       ||.     :|.:|..
 Frog   172 PPTPLPPEDRRQSVSRQ--------PSFT--YSEWMEEKIEDDFLDLDPVPETPVFDCVMDIKPE 226

  Fly   106 TD 107
            .|
 Frog   227 AD 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btnNP_732768.1 Homeodomain 87..143 CDD:459649 11/35 (31%)
hoxa4XP_004915454.1 Homeodomain 158..214 CDD:459649 15/51 (29%)

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