DRSC/TRiP Functional Genomics Resources

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Protein Alignment btn and hoxb5

DIOPT Version :10

Sequence 1:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_001094494.1 Gene:hoxb5 / 100113366 XenbaseID:XB-GENE-1005991 Length:258 Species:Xenopus tropicalis


Alignment Length:166 Identity:58/166 - (34%)
Similarity:84/166 - (50%) Gaps:37/166 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KSWLNQTEGYTDCSYVYDHSASSSYADYNKL-ETNWCNEANDQ-----------WLQNEAP---- 68
            |..|:.|:..|        ||.|| |.:.:: ||:..:|..:.           ..:|.:|    
 Frog   102 KDELSPTDPAT--------SAGSS-AQFTEVEETSASSETEESSTPRSSAPPRALQENSSPGAAG 157

  Fly    69 TGQELPSQRSKLRAISSN--------RKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAVALEL 125
            |..:.|.....:|.:..|        ::.|||:::.|..:||.||.::.||||.||.|||.||.|
 Frog   158 TDGQNPQIFPWMRKLHINHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 222

  Fly   126 TERQVKVWFQNRRMKCKR-IKLEEQQ---GSSAKTP 157
            :|||:|:||||||||.|: .||:...   ||||..|
 Frog   223 SERQIKIWFQNRRMKWKKDNKLKSMSLATGSSAFQP 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btnNP_732768.1 Homeodomain 87..143 CDD:459649 32/55 (58%)
hoxb5NP_001094494.1 Homeodomain 184..240 CDD:459649 32/55 (58%)

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