DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment btn and hoxa2

DIOPT Version :10

Sequence 1:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster
Sequence 2:XP_004915456.1 Gene:hoxa2 / 100038099 XenbaseID:XB-GENE-488087 Length:373 Species:Xenopus tropicalis


Alignment Length:71 Identity:41/71 - (57%)
Similarity:51/71 - (71%) Gaps:1/71 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 NRKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAVALELTERQVKVWFQNRRMKCKR-IKLEEQ 149
            :|:.|||::.|||.:||.||.::.||.|.||.|||..|:||||||||||||||||.|| .:.:|.
 Frog   140 SRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKEN 204

  Fly   150 QGSSAK 155
            |....|
 Frog   205 QNGDGK 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btnNP_732768.1 Homeodomain 87..143 CDD:459649 36/55 (65%)
hoxa2XP_004915456.1 Homeodomain 141..197 CDD:459649 36/55 (65%)

Return to query results.
Submit another query.