DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6937 and dazap1

DIOPT Version :10

Sequence 1:NP_651066.2 Gene:CG6937 / 42662 FlyBaseID:FBgn0038989 Length:356 Species:Drosophila melanogaster
Sequence 2:XP_012815264.1 Gene:dazap1 / 448406 XenbaseID:XB-GENE-856469 Length:411 Species:Xenopus tropicalis


Alignment Length:160 Identity:38/160 - (23%)
Similarity:58/160 - (36%) Gaps:51/160 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 KARPQ---KPKGP-----ERGVVIVKHLPHGFFEQQLRQYFRQFGRVLRVRLARSLRTGNSKGYA 95
            :.||:   :.|||     ....:.|..:||...|.:||:||::||.|..|.:.........:|:.
 Frog    94 RTRPREGWQQKGPRTENSRSNKIFVGGIPHNCGETELREYFKRFGVVTEVVMIYDAEKQRPRGFG 158

  Fly    96 FVEFEYPEVAKVAADTMDNYLMFQKVVKATYIPPEKQTLNFFRTSLKKVVNKAGKEIYVSDLTKA 160
            |:.||            |...:.|.|           .::|.....|||           ::.:|
 Frog   159 FITFE------------DEQSVDQAV-----------NMHFHDIMGKKV-----------EVKRA 189

  Fly   161 TQRSVKKQ-------NNWDESACQKRTVAN 183
            ..|..|.|       |.|...|.|  :.||
 Frog   190 EPRDSKSQTPGPPGSNQWGGRAMQ--STAN 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6937NP_651066.2 RRM_NIFK_like 52..125 CDD:409748 19/72 (26%)
RRN3 <242..>306 CDD:461623
dazap1XP_012815264.1 RRM1_DAZAP1 11..92 CDD:409988
RRM2_DAZAP1 112..191 CDD:409765 24/112 (21%)
Blue background indicates that the domain is not in the aligned region.

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