DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6937 and CSTF2T

DIOPT Version :10

Sequence 1:NP_651066.2 Gene:CG6937 / 42662 FlyBaseID:FBgn0038989 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_056050.1 Gene:CSTF2T / 23283 HGNCID:17086 Length:616 Species:Homo sapiens


Alignment Length:120 Identity:31/120 - (25%)
Similarity:50/120 - (41%) Gaps:12/120 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 VIVKHLPHGFFEQQLRQYFRQFGRVLRVRLARSLRTGNSKGYAFVEFEYPEVAKVAADTMDNYLM 117
            |.|.::|:...|:||:..|.:.|.|:..||.....||..|||.|.|::..|.|..|...::....
Human    18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREF 82

  Fly   118 FQKVVKATYIPPEKQTLNFFRTSLKKVVNKA-------GKEIYVSDLTKATQRSV 165
            ..:.::......||.     :..||.:...|       |..|...|..::..|:|
Human    83 SGRALRVDNAASEKN-----KEELKSLGPAAPIIDSPYGDPIDPEDAPESITRAV 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6937NP_651066.2 RRM_NIFK_like 52..125 CDD:409748 21/71 (30%)
RRN3 <242..>306 CDD:461623
CSTF2TNP_056050.1 RRM_CSTF2_CSTF2T 10..94 CDD:410072 21/75 (28%)
CSTF2_hinge 112..191 CDD:433869 5/21 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..241
PRK12323 <242..>387 CDD:481241
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..418
9 X 5 AA tandem repeats of M-E-T-R-[AG] 418..462
9 X 5 AA tandem repeats of G-[AT]-G-[MI]-Q 505..549
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 542..573
CSTF_C 572..612 CDD:464130
Blue background indicates that the domain is not in the aligned region.

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