DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN6 and CSN6B

DIOPT Version :9

Sequence 1:NP_524451.1 Gene:CSN6 / 42661 FlyBaseID:FBgn0028837 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_567746.1 Gene:CSN6B / 828749 AraportID:AT4G26430 Length:317 Species:Arabidopsis thaliana


Alignment Length:318 Identity:119/318 - (37%)
Similarity:182/318 - (57%) Gaps:33/318 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 MAAAGTSGSVTISLHPLVIMNISEHWTRFRAQHGEPR--------------------QVYGALIG 87
            ||.:.:|| :|..|||||::|||:|:||.:.|...|.                    :|||.:||
plant     1 MAPSSSSG-LTFKLHPLVMLNISDHFTRVKTQLNPPAASCATGNGSNNADAMLLQNPRVYGCVIG 64

  Fly    88 KQKGRNIEIMNSFELKTDVIGDETVINKDYYNKKEQQYKQVFSDLDFIGWYTTGDNPTADDIKIQ 152
            .|:||.:||.|||||..|...|  .:::.:..||::.||:||.|...:|||:||.:.|..|:.|.
plant    65 LQRGRTVEIFNSFELIFDPALD--TLDRSFLEKKQELYKKVFPDFYVLGWYSTGSDATESDMHIH 127

  Fly   153 RQIAAINECPIMLQLNPLSRSVDH----LPLKLFESLIDLVDGEATMLFVPLTYTLATEEAERIG 213
            :.:..|||.|:.:.|||   :::|    ||:.::||...::||....:||..:||:.|.|||||.
plant   128 KALMDINESPVYVLLNP---AINHAQKDLPVTIYESEFHVIDGIPQSIFVHTSYTIETVEAERIS 189

  Fly   214 VDHVARMTSNESGEKSV-VAEHLVAQDSAIKMLNTRIKIVLQYIRDVEAGKLRANQEILREAYAL 277
            |||||.:..::.|..:. :|.||....|||||||:||:::.|:|..::.|.......:||:..:|
plant   190 VDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQHIVAMQKGDKPCENSVLRQVSSL 254

  Fly   278 CHRLPVMQVPAFQEEFYTQCNDVGLISYLGTLTKGCNDMHHFVNKFNMLYDRQGSARR 335
            ...||..:...|.|.|..:.||..|:|||..:|...::|:..|:|||..||:.  :||
plant   255 LRSLPAAESEKFNENFLMEYNDKLLMSYLAMITNCTSNMNEVVDKFNTAYDKH--SRR 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN6NP_524451.1 MPN_CSN6 52..335 CDD:163694 113/307 (37%)
CSN6BNP_567746.1 MPN_CSN6 9..310 CDD:163694 113/307 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 92 1.000 Domainoid score I2594
eggNOG 1 0.900 - - E1_COG1310
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4977
Inparanoid 1 1.050 212 1.000 Inparanoid score I1245
OMA 1 1.010 - - QHG55514
OrthoDB 1 1.010 - - D1455324at2759
OrthoFinder 1 1.000 - - FOG0005913
OrthoInspector 1 1.000 - - otm2543
orthoMCL 1 0.900 - - OOG6_103125
Panther 1 1.100 - - O PTHR10540
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4896
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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