DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN6 and Stambp

DIOPT Version :10

Sequence 1:NP_524451.1 Gene:CSN6 / 42661 FlyBaseID:FBgn0028837 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_077201.1 Gene:Stambp / 70527 MGIID:1917777 Length:424 Species:Mus musculus


Alignment Length:82 Identity:20/82 - (24%)
Similarity:30/82 - (36%) Gaps:19/82 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 DALQSTTNSSFDVPDAAKFNSSDQTYEQSARGKGPEAAGPAASSSSLVPHATKSLIDALPRVRGL 256
            |...||.|:..:..|....||.:...|...|...|         |.:||.|.         .|..
Mouse   144 DVFTSTWNAIMNTFDCCGVNSPEDFEESIFRIINP---------SEMVPEAC---------CRRN 190

  Fly   257 SNLGNTCFFNAVLQCLA 273
            :::|.:.|.|.. :||:
Mouse   191 NHVGESGFSNRE-ECLS 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN6NP_524451.1 MPN_CSN6 52..335 CDD:163694 20/82 (24%)
StambpNP_077201.1 Interaction with CHMP3. /evidence=ECO:0000250|UniProtKB:O95630 1..127
USP8_dimer 7..117 CDD:462647
Interaction with STAM. /evidence=ECO:0000250|UniProtKB:O95630 227..231
MPN_AMSH_like 254..424 CDD:163697
JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182 335..348
Blue background indicates that the domain is not in the aligned region.

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