DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN6 and Mpnd

DIOPT Version :10

Sequence 1:NP_524451.1 Gene:CSN6 / 42661 FlyBaseID:FBgn0028837 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_063123797.1 Gene:Mpnd / 681944 RGDID:1589335 Length:488 Species:Rattus norvegicus


Alignment Length:141 Identity:30/141 - (21%)
Similarity:58/141 - (41%) Gaps:26/141 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 MAVDKTADQNPQPQGNIMAAAGTSG----SVTISLHPLVIMNISEHWTRFRAQHGEPRQVYGALI 86
            |...:.:.:||.....:.:.|..:.    :|.:|.:.|.:::...|.||        .:|.|.|.
  Rat   228 MLGSRDSARNPHTLVEVTSFAAINKFQPFNVAVSSNVLFLLDFHCHLTR--------SEVVGYLG 284

  Fly    87 GKQKGRN--IEIMNSFELKTDVIGDETVINKDYYNKKEQQYKQV--FSDLDFIGWYTTGDN---- 143
            |:....|  :.::.:|..::. :||     .|.....|::..||  ...|..:|||.:..:    
  Rat   285 GRWDINNQMLTVLRAFPCRSR-LGD-----PDTAATVEEEIHQVLFLRGLSLVGWYHSHPHSPAA 343

  Fly   144 PTADDIKIQRQ 154
            |:..||..|.:
  Rat   344 PSLQDIDAQME 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN6NP_524451.1 MPN_CSN6 52..335 CDD:163694 26/111 (23%)
MpndXP_063123797.1 None

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