DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN6 and Eif3f

DIOPT Version :9

Sequence 1:NP_524451.1 Gene:CSN6 / 42661 FlyBaseID:FBgn0028837 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_079620.2 Gene:Eif3f / 66085 MGIID:1913335 Length:361 Species:Mus musculus


Alignment Length:310 Identity:80/310 - (25%)
Similarity:142/310 - (45%) Gaps:19/310 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 MSAKPSTSSSAAAGSSMAVDKTADQNPQPQGNIMAAAGT-SGSVTISLHPLVIMNISEHWTRFRA 73
            :|:.|:.::.||.|.:.|......|.|.|.....|..|. .|...:.|||:::.:|.:.:.  |.
Mouse    51 VSSDPAVAAPAAPGQTPASAPAPAQTPAPSQPGPALPGPFPGGRVVRLHPVILASIVDSYE--RR 113

  Fly    74 QHGEPRQVYGALIGKQKGRNIEIMNSFELKTDVIGDETVINKDYYNKKEQQYKQVFSDLDFIGWY 138
            ..|..| |.|.|:|.....::|:.|.|.:..:...||..::.::.....:.:|:|..:...:|||
Mouse   114 NEGAAR-VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWY 177

  Fly   139 TTGDNPTADDIKIQRQIAAINECPIMLQLNPLSRSVD------HLPLKLFESLIDLVDGEAT-ML 196
            .||.:.|...:.|....:  .|.|     ||:..:||      .:.:|.:.|.:..|.|... ::
Mouse   178 ATGHDITEHSVLIHEYYS--REAP-----NPIHLTVDTGLQHGRMSIKAYVSTLMGVPGRTMGVM 235

  Fly   197 FVPLTYTLATEEAERIGVDHVARMTSNESGEKSVVAEHLVAQDSAIKMLNTRIKIVLQYIRDVEA 261
            |.|||...|..:.||||||.:.: |.........::..|.....|...:...:..||||..||.:
Mouse   236 FTPLTVKYAYYDTERIGVDLIMK-TCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLS 299

  Fly   262 GKLRANQEILREAYALCHRLPVMQVPAFQEEFYTQCNDVGLISYLGTLTK 311
            ||:.|:..:.|...:|.:::|.:....|:....:..||:.:::||..||:
Mouse   300 GKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQ 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN6NP_524451.1 MPN_CSN6 52..335 CDD:163694 68/267 (25%)
Eif3fNP_079620.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..91 11/39 (28%)
MPN_eIF3f 96..358 CDD:163695 68/265 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1310
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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