DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN6 and stambpl1

DIOPT Version :9

Sequence 1:NP_524451.1 Gene:CSN6 / 42661 FlyBaseID:FBgn0028837 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_009304952.1 Gene:stambpl1 / 570542 ZFINID:ZDB-GENE-100215-4 Length:466 Species:Danio rerio


Alignment Length:69 Identity:20/69 - (28%)
Similarity:27/69 - (39%) Gaps:14/69 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 GALIGKQKGRNIEIMNSFELKTDVIGDETVINKDYYNKKEQQYKQVFSDLDF-----IGWYTTGD 142
            |.|.||.      ..|.|.| |.||..:.....||.:.  :..:::||..|.     :||..|..
Zfish   279 GVLCGKL------THNEFVL-THVIVPKQSAGPDYCDM--ENVEELFSYQDHHNLLTLGWIHTHP 334

  Fly   143 NPTA 146
            ..||
Zfish   335 TQTA 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN6NP_524451.1 MPN_CSN6 52..335 CDD:163694 20/69 (29%)
stambpl1XP_009304952.1 USP8_dimer 28..130 CDD:286108
MPN_AMSH_like 250..>369 CDD:163697 20/69 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1310
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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