Protein Alignment CSN6 and Rpn8

DIOPT Version :10

• Sequence 1: NP_524451.1
• Gene: CSN6 / 42661
• FlyBaseID: FBgn0028837
• Length: 341
• Species: Drosophila melanogaster
• Sequence 2: NP_001261167.1
• Gene: Rpn8 / 37894
• FlyBaseID: FBgn0002787
• Length: 358
• Species: Drosophila melanogaster
• Alignment Length: 291
• Identity: 74/291 - (25%)
• Similarity: 143/291 - (49%)
• Gaps: 30/291 - (10%)

  Fly    54 ISLHPLVIMNISEHWTRFRAQHGEPRQVYGALIGKQKGRNI-EIMNSFELKTDVIG-DETV--IN 114
            :.:||||::::.:|:.|. .:.|..::|.|.|:|..:.:.: ::.|||.:..|... |::|  ::
  Fly    11 VIVHPLVLLSVVDHFNRM-GKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLD 74

  Fly   115 KDYYNKKEQQYKQVFSDLDFIGWYTTGDNPTADDIKIQRQIAAINE-----CP----IMLQLNPL 170
            .||.......:|:|.:....:|||.||.....:||       ||||     ||    :::...|.
  Fly    75 HDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDI-------AINELVRRYCPNSVLVIIDAKPK 132

  Fly   171 SRSVDHLPLKLFESLIDL-VDGEAT-MLFVPLTYTLATEEAERIGVDHVARMTSNESGEKSVVAE 233
            ...   ||.:.:.|:.:: .||..| ..|..:...:..||||.:||:|:.|...:.:  ...:::
  Fly   133 DLG---LPTEAYISVEEVHDDGSPTSKTFEHVPSEIGAEEAEEVGVEHLLRDIKDTT--VGSLSQ 192

  Fly   234 HLVAQDSAIKMLNTRIKIVLQYIRDVEAGKLRANQEILREAYALCHRLPVMQVPAFQEEFYTQCN 298
            .:..|...:|.||.:::.:.||::.|...|:..|.:|:.:...:.:.||.:....|....|.:.|
  Fly   193 KITNQLMGLKGLNAQLRDIKQYLQRVGDSKMPINHQIVYQLQDIFNLLPDITNDQFTGTMYVKTN 257

  Fly   299 DVGLISYLGTLTKGCNDMHHFVNKFNMLYDR 329
            |..|:.||.::.:....:|:.:|  |.|.:|
  Fly   258 DQMLVVYLASMVRSIIALHNLIN--NKLANR 286

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CSN6	NP_524451.1	MPN_CSN6	52..335	CDD:163694	74/291 (25%)
Rpn8	NP_001261167.1	MPN_RPN7_8	9..290	CDD:163693	74/291 (25%)