Protein Alignment CSN6 and Brcc3

DIOPT Version :9

• Sequence 1: NP_524451.1
• Gene: CSN6 / 42661
• FlyBaseID: FBgn0028837
• Length: 341
• Species: Drosophila melanogaster
• Sequence 2: NP_001120772.1
• Gene: Brcc3 / 316794
• RGDID: 1588543
• Length: 291
• Species: Rattus norvegicus
• Alignment Length: 170
• Identity: 39/170 - (22%)
• Similarity: 69/170 - (40%)
• Gaps: 43/170 - (25%)

  Fly   135 IGWYTTGDN----PTADDIKIQRQ--------IAAINECPI-------------MLQLNPLSRSV 174
            :|||.:..:    |:..|::.|..        :..|..|.|             ..|.....:|.
  Rat   118 VGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSVQAQKSS 182

  Fly   175 DHLPLKLFESLIDLVD-GEATM-LFVPLTYTLATEEAE---RI-GVDHVARMTSNESGEKSVVAE 233
            |:..:::...::..|. |:..: ..|.|...|..||.:   || .:.|:..:|...:|  ||..:
  Rat   183 DYERIEIPVHVVPHVTIGKVCLESAVELPKILCQEEQDAYRRIHSLTHLDSVTKIHNG--SVFTK 245

  Fly   234 HLVAQDSAIKMLNTRIKIVLQYIRDVEAGKLRANQEILRE 273
            :|.:|.||:.      ..:||::.|    :|..||:.|||
  Rat   246 NLCSQMSAVS------GPLLQWLED----RLEQNQQHLRE 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CSN6	NP_524451.1	MPN_CSN6	52..335	CDD:163694	39/170 (23%)
Brcc3	NP_001120772.1	MPN_BRCC36	13..270	CDD:163699	34/163 (21%)
		JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182	122..135		1/12 (8%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1310
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900