Protein Alignment CSN6 and rpn-8

DIOPT Version :9

• Sequence 1: NP_524451.1
• Gene: CSN6 / 42661
• FlyBaseID: FBgn0028837
• Length: 341
• Species: Drosophila melanogaster
• Sequence 2: NP_491319.1
• Gene: rpn-8 / 172009
• WormBaseID: WBGene00004464
• Length: 362
• Species: Caenorhabditis elegans
• Alignment Length: 299
• Identity: 69/299 - (23%)
• Similarity: 143/299 - (47%)
• Gaps: 26/299 - (8%)

  Fly    40 GNIMAAAGTSGSVTISLHPLVIMNISEHWTRFRAQHGEPRQVYGALIGK-QKGRNIEIMNSFELK 103
            ||:.|....:   .:::||||::::.:|:.|. ::....::|.|.|:|. :|.:.::|.|||.:.
 Worm    30 GNVHANLPVN---KVTVHPLVLLSVVDHFNRV-SKTQSVKRVVGVLLGSMKKDKTLDIGNSFAVP 90

  Fly   104 TDVIGDET---VINKDYYNKKEQQYKQVFSDLDFIGWYTTGDNPTADDIKIQRQIAAINECPIML 165
            .|....:.   .::.||.......:.:|.:....:|||.||.....:||.|..|:...  ||
 Worm    91 FDEDDKDKSTWFLDMDYLESMYGMFYKVAAKEKIVGWYHTGPKLHKNDIAINEQLKRF--CP--- 150

  Fly   166 QLNPLSRSVDHLPLKL---FESLIDL--VDGEAT---MLFVPLTYTLATEEAERIGVDHVARMTS 222
              ||:...:|..|..:   .|:.|::  |..:.|   ..|..:...:..||||.:||:|:.|...
 Worm   151 --NPVLVIIDAEPKNIGLPTEAYIEVQEVHDDGTPPIKTFEHVPSDIGAEEAEEVGVEHLLRDIK 213

  Fly   223 NESGEKSVVAEHLVAQDSAIKMLNTRIKIVLQYIRDVEAGKLRANQEILREAYALCHRLPVMQVP 287
            :::.  ..:::.:..|...::.|.::::.:.:|:.|:..|.|..|..::.....:.:.||.:..|
 Worm   214 DQTA--GTLSQRITDQLMGLRGLQSQLESIEKYLHDIVRGTLPVNHHVIYYVQEVLNLLPDVTHP 276

  Fly   288 AFQEEFYTQCNDVGLISYLGTLTKGCNDMHHFV-NKFNM 325
            .:......|.||..:..|:|:|.:....:|:.: ||.::
 Worm   277 DYIVSQNVQTNDQLMCVYMGSLVRSVVALHNLIDNKISL 315

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CSN6	NP_524451.1	MPN_CSN6	52..335	CDD:163694	66/287 (23%)
rpn-8	NP_491319.1	MPN_RPN7_8	39..320	CDD:163693	66/290 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1310
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810