DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33110 and elovl1a

DIOPT Version :9

Sequence 1:NP_788716.1 Gene:CG33110 / 42659 FlyBaseID:FBgn0053110 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_001005989.1 Gene:elovl1a / 449816 ZFINID:ZDB-GENE-041010-66 Length:315 Species:Danio rerio


Alignment Length:246 Identity:110/246 - (44%)
Similarity:151/246 - (61%) Gaps:4/246 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 DPRAKRFPLMEHPMFTFGMVAVYLSWVLVIGPLFMRDRKPFQLRRTLVVYNAFQVALSGYMFYEH 118
            |.|.:.:|||:.|:....::..|:..||.:||.:|..||||:|...::.||.|.||.:.|..||.
Zfish    21 DARVRDYPLMQSPILMTFILLGYVFSVLYVGPRYMASRKPFRLNTAMIAYNFFMVAFNAYTVYEF 85

  Fly   119 LMAGWLNYYNLKCQPVDYSDSPSSKRMLNLCYLYYLSKLTEFADTMFFVLRKKSSQITWLHVYHH 183
            ||:||...|..:|...|.|.||.:.||:...:|:|.||..|..||:|||||||.||:|:||::||
Zfish    86 LMSGWATTYTWRCDLCDPSSSPQALRMVRAAWLFYFSKYIELLDTVFFVLRKKHSQVTFLHIFHH 150

  Fly   184 SVTPLETWVLVKFL-AGGNATFPNLLNNFVHVCMYFYYMMAAMGPEYAKFLWWKKYMTELQIAQF 247
            ||.|...|..:... |||..:|..|:|..|||.||.||.:||.||.:.|:||||||||.:|:.||
Zfish   151 SVLPWTWWWGITLTPAGGMGSFHALVNACVHVIMYTYYGLAAAGPRFQKYLWWKKYMTAIQLIQF 215

  Fly   248 VLCIFHTLRALFSNQCQFSK--FISALLLLNASIFFCLFMNFYMQSYRKTK 296
            ||...|..:..|..:|.:..  ||. |:|:..:.||.||.||::|:|.|.|
Zfish   216 VLVTGHISQYYFMEKCDYQVPIFIH-LILIYGTFFFILFSNFWIQAYIKGK 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33110NP_788716.1 ELO 61..294 CDD:279492 106/235 (45%)
elovl1aNP_001005989.1 ELO 28..266 CDD:279492 108/239 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 1 1.000 - - FOG0000078
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11157
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.020

Return to query results.
Submit another query.