DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sit and ELO1

DIOPT Version :9

Sequence 1:NP_651063.1 Gene:sit / 42658 FlyBaseID:FBgn0038986 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_012339.1 Gene:ELO1 / 853243 SGDID:S000003732 Length:310 Species:Saccharomyces cerevisiae


Alignment Length:307 Identity:85/307 - (27%)
Similarity:136/307 - (44%) Gaps:69/307 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DYWN---------------FLFTDLADPRTNDWFLIKSPLPLLGILAFYLFFVLSWGPKFMKDRK 59
            ||:|               |.||....|       :..|.|:|..:|.| :.|:..|...:|..|
Yeast    31 DYFNRAVGWATAGRFQPKDFEFTVGKQP-------LSEPRPVLLFIAMY-YVVIFGGRSLVKSCK 87

  Fly    60 PFKLERTLLVYNFFQVALS-VWMV--YEGV--VIWQY--YSWRCQPVDWSRTPKAYREARVVYVY 117
            |.||.....|:|....::| :|::  .|.:  :::::  |...|....|::..:.     :.|:.
Yeast    88 PLKLRFISQVHNLMLTSVSFLWLILMVEQMLPIVYRHGLYFAVCNVESWTQPMET-----LYYLN 147

  Fly   118 YLAKITELLDTIFFVLRKNDRQVTFLHVYHHTVMPMISWGTSKYYPGGHGTFIGWI----NSFVH 178
            |:.|..|..||:..||:  .|::||||.|||....::.:.....|     |.:.|:    |..||
Yeast   148 YMTKFVEFADTVLMVLK--HRKLTFLHTYHHGATALLCYNQLVGY-----TAVTWVPVTLNLAVH 205

  Fly   179 IIMYSYYFLSAFGPQMQKYLWWKKYITNLQMIQFCCAFIHQTQLLYTD--CGY------PRWSVC 235
            ::||.||||||.|.:    :|||.::|.||::||....|....:||..  ..|      |:...|
Yeast   206 VLMYWYYFLSASGIR----VWWKAWVTRLQIVQFMLDLIVVYYVLYQKIVAAYFKNACTPQCEDC 266

  Fly   236 FTLPNAV--------FFYFLFNDFYQKSYKKKQAAAKEKALSADNNN 274
            .....|:        .:.|||..||.:.||:..|:.|:|   .:.||
Yeast   267 LGSMTAIAAGAAILTSYLFLFISFYIEVYKRGSASGKKK---INKNN 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sitNP_651063.1 ELO 28..252 CDD:279492 69/250 (28%)
ELO1NP_012339.1 ELO 58..303 CDD:395916 75/268 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 99 1.000 Domainoid score I1570
eggNOG 1 0.900 - - E1_KOG3071
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 99 1.000 Inparanoid score I1459
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9158
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
TreeFam 00.000 Not matched by this tool.
65.860

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