DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sit and ELO2

DIOPT Version :9

Sequence 1:NP_651063.1 Gene:sit / 42658 FlyBaseID:FBgn0038986 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_009963.1 Gene:ELO2 / 850400 SGDID:S000000630 Length:347 Species:Saccharomyces cerevisiae


Alignment Length:320 Identity:87/320 - (27%)
Similarity:138/320 - (43%) Gaps:66/320 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VDYWNFLFTDLADPRTNDWFL------IKSPLPLLG----ILAFYLFFVLSWGPKFMKDR-KPFK 62
            :..|.. |.|:....||..|:      |...|||..    :.|...::|:.:|.:|:..: ||||
Yeast    33 ISLWEH-FDDVVTRVTNGRFVPSEFQFIAGELPLSTLPPVLYAITAYYVIIFGGRFLLSKSKPFK 96

  Fly    63 LERTLLVYNFFQVALSVWMVYEGV-----VIWQY--YSWRCQPVDWSRTPKAYREARVVYVYYLA 120
            |.....::|....:||:.::...|     :|.|:  |...|....|::.     ...:.|:.|:.
Yeast    97 LNGLFQLHNLVLTSLSLTLLLLMVEQLVPIIVQHGLYFAICNIGAWTQP-----LVTLYYMNYIV 156

  Fly   121 KITELLDTIFFVLRKNDRQVTFLHVYHHTVMPMISW----GTSKYYPGGHGTFIGWI----NSFV 177
            |..|.:||.|.||:  .:::||||.|||....::.:    ||         |.|.|:    |..|
Yeast   157 KFIEFIDTFFLVLK--HKKLTFLHTYHHGATALLCYTQLMGT---------TSISWVPISLNLGV 210

  Fly   178 HIIMYSYYFLSAFGPQMQKYLWWKKYITNLQMIQFC--CAFIH-----QTQLLYTDCGYPRWSVC 235
            |::||.||||:|.|.:    :|||:::|..|:|||.  ..||:     :...||... .|....|
Yeast   211 HVVMYWYYFLAARGIR----VWWKEWVTRFQIIQFVLDIGFIYFAVYQKAVHLYFPI-LPHCGDC 270

  Fly   236 FTLPNAVF--------FYFLFNDFYQKSYKKKQAAAKEKALSADNNNDGCAKDLNKAIQL 287
            .....|.|        :..||..||...||:|..........|   :.|.|..:|:.:.:
Yeast   271 VGSTTATFAGCAIISSYLVLFISFYINVYKRKGTKTSRVVKRA---HGGVAAKVNEYVNV 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sitNP_651063.1 ELO 28..252 CDD:279492 73/264 (28%)
ELO2NP_009963.1 ELO 64..307 CDD:395916 75/263 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 99 1.000 Domainoid score I1570
eggNOG 1 0.900 - - E1_KOG3071
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 99 1.000 Inparanoid score I1459
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000078
OrthoInspector 1 1.000 - - mtm9158
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
TreeFam 00.000 Not matched by this tool.
76.860

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