DRSC/TRiP Functional Genomics Resources

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Protein Alignment sit and AT1G75000

DIOPT Version :10

Sequence 1:NP_651063.1 Gene:sit / 42658 FlyBaseID:FBgn0038986 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_177637.1 Gene:AT1G75000 / 843838 AraportID:AT1G75000 Length:281 Species:Arabidopsis thaliana


Alignment Length:241 Identity:47/241 - (19%)
Similarity:95/241 - (39%) Gaps:59/241 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 WNFLFTDLADPRTNDWFLIKSPLPLLGILAFYLFFVLSWGPKFMKDRKPFKLERTLLVYNFFQVA 76
            |:||||     ..:.:.:....|.||      |...||...:    |:.|.|.....::: ..::
plant    29 WSFLFT-----AVSSYIIAAVTLHLL------LLITLSLSNR----RRGFSLGPIPALHS-LTIS 77

  Fly    77 LSVWMVYEGVVI----------WQYYSWRCQPVDWSRT-PKAYREARVV----YVYYLAKITELL 126
            :...:::.|:::          |.:...|...:.|... |...|.:..|    |.:||::...|.
plant    78 IISAVIFVGILLSAAAEIRDTRWLWRRTRTTALQWFLCFPVGTRASGRVFFWSYAFYLSRFLHLF 142

  Fly   127 DTIFFVLRKNDRQVTFLHVYHHTVMPMISWGTSKYYPGGHGTFIGWINSF--VHIIMYSYYFLSA 189
            .|.|.|:|:  |:::|..:.:.:.:..||:           .::.:..||  |.|::.:..:...
plant   143 RTFFSVIRR--RKLSFFQLINQSSLLCISF-----------LWLEYSQSFQVVAILLTTVSYAVV 194

  Fly   190 FGPQMQKYLWWKKYITNLQMIQFCCAFIHQTQLLYTDCGYPRWSVC 235
            :|     |.:|    |.:.:...|..|:...|.:...|    .:||
plant   195 YG-----YRFW----TEIGLRGACFPFVGNCQAILLGC----MTVC 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sitNP_651063.1 ELO 28..252 CDD:460083 42/225 (19%)
AT1G75000NP_177637.1 ELO 26..269 CDD:460083 47/241 (20%)

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