DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sit and Elovl5

DIOPT Version :10

Sequence 1:NP_651063.1 Gene:sit / 42658 FlyBaseID:FBgn0038986 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_030100414.1 Gene:Elovl5 / 68801 MGIID:1916051 Length:340 Species:Mus musculus


Alignment Length:261 Identity:102/261 - (39%)
Similarity:145/261 - (55%) Gaps:7/261 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DPRTNDWFLIKSPLPLLGILAFYLFFVLSW-GPKFMKDRKPFKLERTLLVYNFFQVALSVWMVYE 84
            |.|...|||:.:.:|.......||..|  | |||:||:|:||.....|.:||.....||::|.||
Mouse    61 DTRVKGWFLLDNYIPTFVCSVIYLLIV--WLGPKYMKNRQPFSCRGILQLYNLGLTLLSLYMFYE 123

  Fly    85 GVV-IWQ-YYSWRCQPVDWSRTPKAYREARVVYVYYLAKITELLDTIFFVLRKNDRQVTFLHVYH 147
            .|. :|: .|::.||... |......:..||::.||.:|:.|.:||.||:||||:.|:|.|||||
Mouse   124 LVTGVWEGKYNFFCQGTR-SAGESDMKIIRVLWWYYFSKLIEFMDTFFFILRKNNHQITVLHVYH 187

  Fly   148 HTVMPMISWGTSKYYPGGHGTFIGWINSFVHIIMYSYYFLSAFGPQMQKYLWWKKYITNLQMIQF 212
            |..|..|.|....:.|.||..|...:|||:|::|||||.||:. |.|:.|||||||||..|::||
Mouse   188 HATMLNIWWFVMNWVPCGHSYFGATLNSFIHVLMYSYYGLSSI-PSMRPYLWWKKYITQGQLVQF 251

  Fly   213 CCAFIHQTQLLYTDCGYPRWSVCFTLPNAVFFYFLFNDFYQKSYKKKQAAAKEKALSADNNNDGC 277
            ....|..|..::..|.:|...:.|.:...:....||.:||.::|.||.|:.::..|....|....
Mouse   252 VLTIIQTTCGVFWPCSFPLGWLFFQIGYMISLIALFTNFYIQTYNKKGASRRKDHLKGHQNGSVA 316

  Fly   278 A 278
            |
Mouse   317 A 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sitNP_651063.1 ELO 28..252 CDD:460083 90/226 (40%)
Elovl5XP_030100414.1 ELO 68..301 CDD:460083 95/236 (40%)

Return to query results.
Submit another query.