DRSC/TRiP Functional Genomics Resources

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Protein Alignment sit and elovl6

DIOPT Version :9

Sequence 1:NP_651063.1 Gene:sit / 42658 FlyBaseID:FBgn0038986 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001017257.2 Gene:elovl6 / 550011 XenbaseID:XB-GENE-942876 Length:265 Species:Xenopus tropicalis


Alignment Length:243 Identity:65/243 - (26%)
Similarity:112/243 - (46%) Gaps:38/243 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 AFYLFFVLSWGPKFMKDRKPFKLERTLLVYNFFQVALSVWMVYEGVVIWQY--YSWRCQPVDWSR 103
            |.|..|:.. |...||.|:.|:|.:.|::::   ::|:|:.::..|....|  |....:.:..|.
 Frog    38 ALYAAFIFG-GRHLMKQREKFELRKPLILWS---LSLAVFSIFGAVRTGAYMLYILMTKGLKQSV 98

  Fly   104 TPKAYREARV----VYVYYLAKITELLDTIFFVLRKNDRQVTFLHVYHHTVMPMISWGTSKYYPG 164
            ..:::....|    .|.:.|:|..||.||||.:|||  :::.|||.|||..:.:.||.:.|....
 Frog    99 CDQSFYYGPVSKFWAYAFVLSKAPELGDTIFIILRK--QKLIFLHWYHHITVLLYSWYSYKDMVA 161

  Fly   165 GHGTFIGWINSFVHIIMYSYYFLSAFGPQMQKYLWWKKYITNLQMIQFCCAFI------------ 217
            |.|.|: .:|..||.:|||||.|.|.|.::.:.  :...||..|:.|.....:            
 Frog   162 GGGWFM-TMNYGVHAVMYSYYALRAAGFRVSRK--FAMLITLSQITQMIIGCVVNYLVFSWMQQG 223

  Fly   218 ----HQTQLLYTDCGYPRWSVCFTLPNAVFFYFLFNDFYQKSYKKKQA 261
                |...::::...|..:.|       :|.:|.|..:..|:.|..:|
 Frog   224 QCPSHVQNIVWSSIMYLSYFV-------LFCHFFFEAYITKTRKASKA 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sitNP_651063.1 ELO 28..252 CDD:279492 62/232 (27%)
elovl6NP_001017257.2 ELO 25..262 CDD:366492 64/239 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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