DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sit and elovl5

DIOPT Version :10

Sequence 1:NP_651063.1 Gene:sit / 42658 FlyBaseID:FBgn0038986 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001011248.1 Gene:elovl5 / 496694 XenbaseID:XB-GENE-952346 Length:295 Species:Xenopus tropicalis


Alignment Length:279 Identity:105/279 - (37%)
Similarity:155/279 - (55%) Gaps:11/279 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DPRTNDWFLIKSPLPLLGILAFYLFFVLSW-GPKFMKDRKPFKLERTLLVYNFFQVALSVWMVYE 84
            |||...|.|:.:.:|.:...|.|||.|  | |||:|::|.|......|:|||.....||::|.||
 Frog    20 DPRVRGWLLLDNYVPTILFTALYLFIV--WRGPKYMQNRPPVSCRGILVVYNLGLTLLSLYMFYE 82

  Fly    85 GVV-IWQ-YYSWRCQPVDWSRTPKAYREARVVYVYYLAKITELLDTIFFVLRKNDRQVTFLHVYH 147
            .|. :|: .|::.||..: |......:..||::.||.:|:.|.:||.||:||||:.|:|.|||||
 Frog    83 LVTGVWEGGYNFFCQDTN-SGGDADTKIVRVLWWYYFSKLIEFMDTFFFILRKNNHQITVLHVYH 146

  Fly   148 HTVMPMISWGTSKYYPGGHGTFIGWINSFVHIIMYSYYFLSAFGPQMQKYLWWKKYITNLQMIQF 212
            |..|..|.|....:.|.||..|...:|||:|::|||||.|||. |.|:.|||||||||..|:.||
 Frog   147 HASMLNIWWFVMNWVPCGHSYFGATLNSFIHVLMYSYYGLSAI-PAMRPYLWWKKYITQCQLTQF 210

  Fly   213 CCAFIHQTQLLYTDCGYPRWSVCFTLPNAVFFYFLFNDFYQKSYKKKQAAAKEK----ALSADNN 273
            .......|..:...|.:|...:.|.....:....||.:||.|:|.||.::.:::    :.||.|.
 Frog   211 VLTMTQTTCAMIWPCKFPMGWLYFQNCYMISLIILFGNFYIKTYNKKTSSRRKEYQNGSASAVNG 275

  Fly   274 NDGCAKDLNKAIQLQQEKQ 292
            :......|...::.::::|
 Frog   276 HTNSFSSLEDNVKQRKQRQ 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sitNP_651063.1 ELO 28..252 CDD:460083 90/226 (40%)
elovl5NP_001011248.1 ELO 27..260 CDD:460083 96/236 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 265..295 5/30 (17%)

Return to query results.
Submit another query.