DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sit and bond

DIOPT Version :10

Sequence 1:NP_651063.1 Gene:sit / 42658 FlyBaseID:FBgn0038986 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_651062.3 Gene:bond / 42657 FlyBaseID:FBgn0260942 Length:322 Species:Drosophila melanogaster


Alignment Length:291 Identity:120/291 - (41%)
Similarity:169/291 - (58%) Gaps:26/291 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DPRTNDWFLIKSPLPLLGILAFYLFFVLSWGPKFMKDRKPFKLERTLLVYNFFQVALSVWM---- 81
            |...:.|||:.||:|::.::..||.|||..||::||:|||..|:|.::.||.|||..|:||    
  Fly    20 DETVDSWFLMSSPMPVVAVVLVYLAFVLKIGPEYMKNRKPMDLKRIMVFYNAFQVLYSIWMCRTS 84

  Fly    82 VYEGVVIWQYYSWRCQPVDWSRTPKAYREARV-----VYVYYLAKITELLDTIFFVLRKNDRQVT 141
            :.|..|:...:|.:|   :.:||    ||..:     .:.|:.:||.:||||.||||||.|.||:
  Fly    85 IQESNVMASIFSKKC---EINRT----REQNLTLYSGAWFYFFSKIIDLLDTTFFVLRKKDNQVS 142

  Fly   142 FLHVYHHTVMPMISWGTSKYYPGGHGTFIGWINSFVHIIMYSYYFLSAFGPQMQKYLWWKKYITN 206
            ||||||||:..:.|||..||.||..|..||.:||.||||||.||.::|.|||.|||||||||:|:
  Fly   143 FLHVYHHTITVLFSWGYLKYAPGEQGVIIGILNSGVHIIMYFYYMVAAMGPQYQKYLWWKKYMTS 207

  Fly   207 LQMIQFCCAFIHQTQLLYTDCGYPRWSVCFTLPNAVFFYFLFNDFYQKSYKKKQ----------A 261
            :|:|||.....:...:....|..|:....|.:.|.|.|.:||.:||:|:|||.:          :
  Fly   208 IQLIQFVLILGYMLTVGAKGCNMPKTLTFFFVGNTVIFLYLFGNFYRKTYKKAKSVDGGSRTTGS 272

  Fly   262 AAKEKALSADNNNDGCAKDLNKAIQLQQEKQ 292
            :..:.||.|........:.:|....|.|..|
  Fly   273 SLAQSALRAAGGMGCMPQTMNAGKHLLQNGQ 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sitNP_651063.1 ELO 28..252 CDD:460083 105/232 (45%)
bondNP_651062.3 ELO 45..263 CDD:460083 104/224 (46%)

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