DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sit and elovl1b

DIOPT Version :10

Sequence 1:NP_651063.1 Gene:sit / 42658 FlyBaseID:FBgn0038986 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_998581.2 Gene:elovl1b / 406725 ZFINID:ZDB-GENE-040426-2755 Length:320 Species:Danio rerio


Alignment Length:263 Identity:112/263 - (42%)
Similarity:162/263 - (61%) Gaps:16/263 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DPRTNDWFLIKSPLPLLGILAFYLFFVLSWGPKFMKDRKPFKLERTLLVYNFFQVALSVWMVYEG 85
            |||..|:.|::||..:..||..||||||..|||||.:||||:|:..:::||...|.||.::|||.
Zfish    21 DPRLKDYPLMESPFSMTAILLAYLFFVLYAGPKFMANRKPFQLKEAMIIYNLSLVGLSAYIVYEF 85

  Fly    86 VVI-WQY-YSWRCQPVDWSRTPKAYREARVVYVYYLAKITELLDTIFFVLRKNDRQVTFLHVYHH 148
            ::. |.. |:|||.|.|:|.:|:..|.|||.:::..:|..||:||:||||||...|:||||::||
Zfish    86 LMSGWATGYTWRCDPCDYSNSPQGLRMARVAWLFLFSKFIELMDTVFFVLRKKHSQITFLHIFHH 150

  Fly   149 TVMPMISWGTSKYYPGGHGTFIGWINSFVHIIMYSYYFLSAFGPQMQKYLWWKKYITNLQMIQFC 213
            :.||...|......|||.|:|...:||.||:|||.||.|||.||:.||:||||||:|.:|:.||.
Zfish   151 SFMPWTWWWGVSIVPGGMGSFHAMVNSCVHVIMYFYYGLSAAGPRFQKFLWWKKYMTAIQLTQFV 215

  Fly   214 CAFIHQTQLLYTDCGYPRWSVCFTLPNAV--------FFYFLFNDFYQKSYKKKQAAAKEKALSA 270
            ...:|.:|..:.:      |..|.:|..:        ||:.||::|:.::|.|.:...|....:.
Zfish   216 LVSLHVSQWYFME------SCDFQVPVIIHLIWLYGTFFFVLFSNFWYQAYIKGKRLPKNTQETT 274

  Fly   271 DNN 273
            ..|
Zfish   275 KTN 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sitNP_651063.1 ELO 28..252 CDD:460083 103/233 (44%)
elovl1bNP_998581.2 ELO 28..268 CDD:460083 106/245 (43%)

Return to query results.
Submit another query.