DRSC/TRiP Functional Genomics Resources

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Protein Alignment sit and Elo68beta

DIOPT Version :10

Sequence 1:NP_651063.1 Gene:sit / 42658 FlyBaseID:FBgn0038986 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001097580.1 Gene:Elo68beta / 39245 FlyBaseID:FBgn0036128 Length:269 Species:Drosophila melanogaster


Alignment Length:264 Identity:101/264 - (38%)
Similarity:150/264 - (56%) Gaps:3/264 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NATQVDYWNFLFTDLADPRTNDWFLIKSPLPLLGILAFYLFFVLSWGPKFMKDRKPFKLERTLLV 69
            |.|:.:.:::.|.||||.||.||.|:|||..::.:||.||..| .:.||:....||.:|...|..
  Fly     7 NDTKTESYSYPFADLADERTQDWPLVKSPWNIIALLALYLLMV-RYAPKWTARCKPLQLRVPLFC 70

  Fly    70 YNFFQVALSVWMVYEGVV--IWQYYSWRCQPVDWSRTPKAYREARVVYVYYLAKITELLDTIFFV 132
            ::...:.|:.::..|.:.  :...|::.||....|..|...|.|..::.:|::||.|.:||.||:
  Fly    71 HSLAMIFLNGYICLEFLTASLSLGYNFACQECRVSHDPHEIRIAAAMWWFYISKILEFVDTAFFI 135

  Fly   133 LRKNDRQVTFLHVYHHTVMPMISWGTSKYYPGGHGTFIGWINSFVHIIMYSYYFLSAFGPQMQKY 197
            ||....|::|||||||:.|.:..|...|:.|.|...|...||||||:||||||.||..||::|::
  Fly   136 LRHKWNQLSFLHVYHHSTMFLFCWTYVKWLPTGSTFFPSMINSFVHVIMYSYYALSVLGPRVQRF 200

  Fly   198 LWWKKYITNLQMIQFCCAFIHQTQLLYTDCGYPRWSVCFTLPNAVFFYFLFNDFYQKSYKKKQAA 262
            ||||:|:|.||::||...|...:||::..|.|.:|.........|.|.|:|..||.:.|......
  Fly   201 LWWKRYLTGLQLVQFTIIFFWASQLVFRGCEYGKWLTPIGAAYMVPFLFMFGRFYAQKYCVSAVV 265

  Fly   263 AKEK 266
            .|.|
  Fly   266 KKAK 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sitNP_651063.1 ELO 28..252 CDD:460083 85/225 (38%)
Elo68betaNP_001097580.1 ELO 48..267 CDD:460083 80/219 (37%)

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