DRSC/TRiP Functional Genomics Resources

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Protein Alignment sit and Elo68alpha

DIOPT Version :10

Sequence 1:NP_651063.1 Gene:sit / 42658 FlyBaseID:FBgn0038986 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_729666.2 Gene:Elo68alpha / 317841 FlyBaseID:FBgn0052072 Length:262 Species:Drosophila melanogaster


Alignment Length:253 Identity:96/253 - (37%)
Similarity:137/253 - (54%) Gaps:23/253 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FTDLADPRTNDWFLIKS--PLPLLGILAFYLFFVLSWGPKFMKDRKPFKLERTLLVYNFFQVALS 78
            |.|..|.||.:|.|:.|  .:|:|  |:.||..| .:.||:....||.:|...|..::...|.|:
  Fly    11 FPDQPDERTRNWPLVDSFWTVPVL--LSIYLLMV-RYAPKWTTRHKPLQLRAPLFCHSLAMVFLN 72

  Fly    79 VWMVYEGVVIWQY-------YSWRCQPVDWSRTPKAYREARVVYVYYLAKITELLDTIFFVLRKN 136
            .::..|     .|       |::.|||...|..|...|..:..:.:|::||.|..||.||:||:.
  Fly    73 GYICLE-----LYAATRDLDYNFGCQPCRVSFDPHEMRLTKAFWWFYISKILEFADTAFFILRQK 132

  Fly   137 DRQVTFLHVYHHTVMPMISWGTSKYYPGGHGTFIGWINSFVHIIMYSYYFLSAFGPQMQKYLWWK 201
            ..|::|||||||:.|.:..|...|:.|.|.......||||||||||.||.||..||::|::||||
  Fly   133 WSQLSFLHVYHHSTMFVFCWILIKWMPTGSTYVPAMINSFVHIIMYGYYALSVLGPRVQRFLWWK 197

  Fly   202 KYITNLQMIQFCCAFIHQTQLLYTDCGYPRWSVCFTLPNAVF---FYFLFNDFYQKSY 256
            :|:|.||::||...|...:|:|...|.|..|   .||..|::   |.|:|..||.:.|
  Fly   198 RYLTGLQLVQFTIIFFWASQMLVRGCEYGTW---ITLSMAIYSLPFLFMFGKFYMQKY 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sitNP_651063.1 ELO 28..252 CDD:460083 87/235 (37%)
Elo68alphaNP_729666.2 ELO 23..260 CDD:460083 90/241 (37%)

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