DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sit and elo-9

DIOPT Version :9

Sequence 1:NP_651063.1 Gene:sit / 42658 FlyBaseID:FBgn0038986 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_497086.1 Gene:elo-9 / 190207 WormBaseID:WBGene00001247 Length:286 Species:Caenorhabditis elegans


Alignment Length:251 Identity:75/251 - (29%)
Similarity:114/251 - (45%) Gaps:35/251 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 NDWFLIKSP-LPLLGILAFYLFFVLSWGPKFMKDRKPFKLERTLLVYNFFQVALSV---WM---- 81
            |.||  ||. |....|:|..|.      .::|:.|||..:...||.:|.|....|:   |.    
 Worm    47 NHWF--KSVYLSAAYIIATNLL------QRYMESRKPKSMRPLLLAWNGFLAVFSIMGTWRFGIE 103

  Fly    82 VYEGVVIWQYYSWRCQPVDWSRTPKAYREARVVYVYYLAKITELLDTIFFVLRKNDRQVTFLHVY 146
            .|:.|....:....|..|: .|:|.|:...    ::.|:||.|..||:|.||||  |.|.|||.|
 Worm   104 FYDAVFRRGFIDSICLAVN-PRSPSAFWAC----MFALSKIAEFGDTMFLVLRK--RPVIFLHWY 161

  Fly   147 HHTVMPMISWGTSKYYPGGHGTFIGWINSFVHIIMYSYYFLSAFGPQMQKYLWWKKYITNLQMIQ 211
            ||.|:.::||..:.........|| ::|..||.|||:||.:::.|.::.|.:  ...:|.||.:|
 Worm   162 HHAVVLILSWHAAIELTAPGRWFI-FMNYLVHSIMYTYYAITSIGYRLPKIV--SMTVTFLQTLQ 223

  Fly   212 FCCAFIHQTQLLYTD-----C--GYPRWSVCFTLPNAVFFYFLFNDFYQKSYKKKQ 260
            ..........:||..     |  .|...::.|.:  ...|..||:.|:..:|..|:
 Worm   224 MLIGVSISCIVLYLKLNGEMCQQSYDNLALSFGI--YASFLVLFSSFFNNAYLVKK 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sitNP_651063.1 ELO 28..252 CDD:279492 70/238 (29%)
elo-9NP_497086.1 ELO 44..274 CDD:279492 73/246 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3071
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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