DRSC/TRiP Functional Genomics Resources

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Protein Alignment sit and elo-7

DIOPT Version :10

Sequence 1:NP_651063.1 Gene:sit / 42658 FlyBaseID:FBgn0038986 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001255397.1 Gene:elo-7 / 186426 WormBaseID:WBGene00001245 Length:309 Species:Caenorhabditis elegans


Alignment Length:236 Identity:71/236 - (30%)
Similarity:115/236 - (48%) Gaps:35/236 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 YLFFVLSWGPKFMKDRKPFKLERTLLVYNFFQVALSVWMVY----------EGVVIWQYYSWRCQ 97
            |:..|.|. .:||:||:||:|...|.::|||   |||:.:|          :.:.::..|...|:
 Worm    76 YVILVFSI-KRFMRDREPFQLTTALRLWNFF---LSVFSIYGSWTMFPFMVQQIRLYGLYGCGCE 136

  Fly    98 PVDWSRTPKAYREARV-VYVYYLAKITELLDTIFFVLRKNDRQVTFLHVYHHTVMPMISWGTSKY 161
            .:  |..|.   :|.. :::..|:|..|.:||.|.||||  :.:.|||.|||  |....:..|.|
 Worm   137 AL--SNLPS---QAEYWLFLTILSKAVEFVDTFFLVLRK--KPLIFLHWYHH--MATFVFFCSNY 192

  Fly   162 YPGGHGTFIGWI-NSFVHIIMYSYYFLSAFGPQMQKYLWWKKYITNLQMIQFCCAFIHQTQLLYT 225
            ......:.:|.| |.|||..||.|||..:...::...:  ...:|.||:.||.| ||:...|:|.
 Worm   193 PTPSSQSRVGVIVNLFVHAFMYPYYFTRSMNIKVPAKI--SMAVTVLQLTQFMC-FIYGCTLMYY 254

  Fly   226 D-------CGYPRWSVCFTLPNAVFFYFLFNDFYQKSYKKK 259
            .       |..|.:.:..|...:..::.||.:|:.|:|.::
 Worm   255 SLATNQYTCDTPMFVLHSTFALSSSYFVLFANFFHKAYLQR 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sitNP_651063.1 ELO 28..252 CDD:460083 68/227 (30%)
elo-7NP_001255397.1 ELO 61..298 CDD:460083 71/236 (30%)

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