DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sit and elo-6

DIOPT Version :9

Sequence 1:NP_651063.1 Gene:sit / 42658 FlyBaseID:FBgn0038986 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_500797.1 Gene:elo-6 / 177321 WormBaseID:WBGene00001244 Length:274 Species:Caenorhabditis elegans


Alignment Length:269 Identity:75/269 - (27%)
Similarity:117/269 - (43%) Gaps:76/269 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 AFYL---FFVLSWGPK-FMKDRKPFKLERTLLVYN--------------------------FFQV 75
            ||::   :.|:.:|.| .|.:||||.|...|.::|                          ||:.
 Worm    33 AFWISMAYVVVIFGLKAVMTNRKPFDLTGPLNLWNAGLAIFSTLGSLATTFGLLHEFFSRGFFES 97

  Fly    76 ALSVWMVYEGVVIWQYYSWRCQPVDWSRTPKAYREARVVYVYYLAKITELLDTIFFVLRKNDRQV 140
            .:.:...|.|  :...::|                     ::.|:|:.|..||:|.:|||  :.:
 Worm    98 YIHIGDFYNG--LSGMFTW---------------------LFVLSKVAEFGDTLFIILRK--KPL 137

  Fly   141 TFLHVYHHTVMPMISWGTSKYYPG-GHGTFIGWINSFVHIIMYSYYFLSAFGPQMQKYLWWKKYI 204
            .|||.|||.:  .:::....:... |..|:|.|:|..||.|||.||.|.:||.::.  .|..|.|
 Worm   138 MFLHWYHHVL--TMNYAFMSFEANLGFNTWITWMNFSVHSIMYGYYMLRSFGVKVP--AWIAKNI 198

  Fly   205 TNLQMIQFCCA-FI--HQTQLLYT------DCGYPRWSVCFTLPNAVFFYFLFNDFYQKSYKK-- 258
            |.:|::||... ||  |...|..|      ..|| .|   |.|...:.:..||.:||.:||.|  
 Worm   199 TTMQILQFVITHFILFHVGYLAVTGQSVDSTPGY-YW---FCLLMEISYVVLFGNFYYQSYIKGG 259

  Fly   259 -KQAAAKEK 266
             |:..|::|
 Worm   260 GKKFNAEKK 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sitNP_651063.1 ELO 28..252 CDD:279492 67/250 (27%)
elo-6NP_500797.1 ELO 33..262 CDD:279492 72/261 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3071
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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