DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment sit and MGC115163

DIOPT Version :9

Sequence 1:	NP_651063.1	Gene:	sit / 42658	FlyBaseID:	FBgn0038986	Length:	295	Species:	Drosophila melanogaster
Sequence 2:	XP_017953097.1	Gene:	MGC115163 / 101732387	XenbaseID:	XB-GENE-5892987	Length:	277	Species:	Xenopus tropicalis

Alignment Length:	275	Identity:	116/275 - (42%)
Similarity:	163/275 - (59%)	Gaps:	17/275 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MAAVNATQVDYWNFLFTDLADPRTNDWFLIKSPLPLLGILAFYLFFVLSWGPKFMKDRKPFKLER 65
            |.::.....|::::...: .||||:.|.|:.||:|::.|.|.||..| :.||:.|..|:.|.|..
Frog    13 MGSMWEAATDFYSWALHN-GDPRTDPWLLVYSPVPVILIFAVYLVLV-ALGPRLMDKREAFTLRS 75

  Fly    66 TLLVYNFFQVALSVWMVYEGVV--IWQYYSWRCQPVDWSRTPKAYREARVVYVYYLAKITELLDT 128
            .||:||...|.||.:|.||.:|  :...||:.|||||::.:....|.|||.:.::.:|:.|||||
Frog    76 VLLIYNLALVGLSAYMFYEFLVTSVLAGYSYLCQPVDYTDSQLGLRMARVCWWFFFSKVIELLDT 140

  Fly   129 IFFVLRKNDRQVTFLHVYHHTVMPMISWGTSKYYPGGHGTFIGWINSFVHIIMYSYYFLSAFGPQ 193
            |||::||...|::|||||||..|....|...||..||...|||.:||||||.||.||.|:..||:
Frog   141 IFFIMRKKFNQISFLHVYHHATMIFNWWAGVKYVAGGQAFFIGMLNSFVHIFMYLYYGLAVLGPK 205

  Fly   194 MQKYLWWKKYITNLQMIQFCCAFIHQTQLLYTDCGYPRWSVCFTLPNAVFFY-----FLFNDFYQ 253
            :|||||||:|:|.||:.||....:|....|.|||.:|.     ....|||.|     .||.:||.
Frog   206 VQKYLWWKRYLTLLQLTQFGAIALHSGYNLVTDCPFPD-----GFNAAVFAYIVSLIILFLNFYY 265

  Fly   254 KSYKKKQAAAKEKAL 268
            ::|.::   .:||.|
Frog   266 QTYLRR---PREKKL 277

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
sit	NP_651063.1	ELO	28..252	CDD:279492	103/230 (45%)
MGC115163	XP_017953097.1	ELO	40..276	CDD:366492	107/244 (44%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1094172at2759
OrthoFinder	1	1.000	-	-		FOG0000078
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X54
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.920