DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sit and elovl4

DIOPT Version :9

Sequence 1:NP_651063.1 Gene:sit / 42658 FlyBaseID:FBgn0038986 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_002936253.1 Gene:elovl4 / 100496222 XenbaseID:XB-GENE-953769 Length:328 Species:Xenopus tropicalis


Alignment Length:302 Identity:119/302 - (39%)
Similarity:164/302 - (54%) Gaps:32/302 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 WNFLFTDLADPRTNDWFLIKSPLPLLGILAFYLFFVLSW-GPKFMKDRKPFKLERTLLVYNFFQV 75
            |.|   .:||.|...|.|::||||.|.|...||..|  | ||||||:|:||:|...|:.|||..|
 Frog    18 WCF---SIADKRVEKWPLMQSPLPTLAISTAYLLVV--WLGPKFMKNREPFQLRYLLIAYNFGMV 77

  Fly    76 ALSVWMVYE--------GVVIWQYYSWRCQPVDWSRTPKAYREARVVYVYYLAKITELLDTIFFV 132
            .|:.::..|        |      ||:.|||||:|......|.|..::.||::|..|..||:||:
 Frog    78 ILNFFIFKELFLGAKAAG------YSYICQPVDYSDDENEVRVASALWWYYVSKGVEYFDTVFFI 136

  Fly   133 LRKNDRQVTFLHVYHHTVMPMISWGTSKYYPGGHGTFIGWINSFVHIIMYSYYFLSAFGPQMQKY 197
            |||...|::|||||||..|..:.|...|:..||...|...:|:.:|::||.||.|:|.||.:|||
 Frog   137 LRKKFNQISFLHVYHHCTMFTLWWIGIKWVAGGQSFFGAHMNALIHVVMYLYYGLAACGPHLQKY 201

  Fly   198 LWWKKYITNLQMIQFCCAFIHQTQLLYTDCGYPRWSVCFTLPNAVFFYFLFNDFYQKSYKKKQAA 262
            ||||:|:|.||::||.....|....||.||.:|:|.....:..|:.|..||.:||.::|...:|.
 Frog   202 LWWKRYLTILQLVQFHVTIGHTALSLYIDCPFPKWMHWALIVYAITFIILFVNFYYRTYNAPKAP 266

  Fly   263 AKE-KAL--------SADNNNDGC---AKDLNKAIQLQQEKQ 292
            ||. |:|        ...:.|..|   .|.:|.|:.....||
 Frog   267 AKSGKSLINGKTSVNGKSSVNGKCQINGKLMNGAVNGAVSKQ 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sitNP_651063.1 ELO 28..252 CDD:279492 98/232 (42%)
elovl4XP_002936253.1 ELO 31..268 CDD:366492 102/244 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H41488
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 1 1.000 - - FOG0000078
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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