DRSC/TRiP Functional Genomics Resources

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Protein Alignment bond and sit

DIOPT Version :10

Sequence 1:NP_651062.3 Gene:bond / 42657 FlyBaseID:FBgn0260942 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_651063.1 Gene:sit / 42658 FlyBaseID:FBgn0038986 Length:295 Species:Drosophila melanogaster


Alignment Length:291 Identity:120/291 - (41%)
Similarity:169/291 - (58%) Gaps:26/291 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DETVDSWFLMSSPMPVVAVVLVYLAFVLKIGPEYMKNRKPMDLKRIMVFYNAFQVLYSIWMCRTS 84
            |...:.|||:.||:|::.::..||.|||..||::||:|||..|:|.::.||.|||..|:||    
  Fly    21 DPRTNDWFLIKSPLPLLGILAFYLFFVLSWGPKFMKDRKPFKLERTLLVYNFFQVALSVWM---- 81

  Fly    85 IQESNVMASIFSKKC---EINRT----REQNLTLYSGAWFYFFSKIIDLLDTTFFVLRKKDNQVS 142
            :.|..|:...:|.:|   :.:||    ||..:     .:.|:.:||.:||||.||||||.|.||:
  Fly    82 VYEGVVIWQYYSWRCQPVDWSRTPKAYREARV-----VYVYYLAKITELLDTIFFVLRKNDRQVT 141

  Fly   143 FLHVYHHTITVLFSWGYLKYAPGEQGVIIGILNSGVHIIMYFYYMVAAMGPQYQKYLWWKKYMTS 207
            ||||||||:..:.|||..||.||..|..||.:||.||||||.||.::|.|||.|||||||||:|:
  Fly   142 FLHVYHHTVMPMISWGTSKYYPGGHGTFIGWINSFVHIIMYSYYFLSAFGPQMQKYLWWKKYITN 206

  Fly   208 IQLIQFVLILGYMLTVGAKGCNMPKTLTFFFVGNTVIFLYLFGNFYRKTYKKAKSVDGGSRTTGS 272
            :|:|||.....:...:....|..|:....|.:.|.|.|.:||.:||:|:|||.:          :
  Fly   207 LQMIQFCCAFIHQTQLLYTDCGYPRWSVCFTLPNAVFFYFLFNDFYQKSYKKKQ----------A 261

  Fly   273 SLAQSALRAAGGMGCMPQTMNAGKHLLQNGQ 303
            :..:.||.|........:.:|....|.|..|
  Fly   262 AAKEKALSADNNNDGCAKDLNKAIQLQQEKQ 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bondNP_651062.3 ELO 45..263 CDD:460083 104/224 (46%)
sitNP_651063.1 ELO 28..252 CDD:460083 105/232 (45%)

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