DRSC/TRiP Functional Genomics Resources

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Protein Alignment bond and Elovl4

DIOPT Version :10

Sequence 1:NP_651062.3 Gene:bond / 42657 FlyBaseID:FBgn0260942 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_001178725.1 Gene:Elovl4 / 315851 RGDID:1305630 Length:314 Species:Rattus norvegicus


Alignment Length:303 Identity:105/303 - (34%)
Similarity:163/303 - (53%) Gaps:45/303 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DETVDSWFLMSSPMPVVAVVLVYLAFVLKIGPEYMKNRKPMDLKRIMVFYNAFQVLYSIWMCR-- 82
            |:.|:.|.||.||.|.:::..:||.||. :||::||:|:|..::.:::.||...||.::::.|  
  Rat    34 DKRVEDWPLMQSPWPTLSISTLYLLFVW-LGPKWMKDREPFQMRLVLIIYNFGMVLLNLFIFREL 97

  Fly    83 -------------TSIQESNVMASIFSKKCEINRTREQNLTLYSGAWFYFFSKIIDLLDTTFFVL 134
                         .|:..||          ::|..|     :.:..|:||.||.::.|||.||:|
  Rat    98 FMGSYNAGYSYICQSVDYSN----------DVNEVR-----IAAALWWYFVSKGVEYLDTVFFIL 147

  Fly   135 RKKDNQVSFLHVYHHTITVLFSWGYLKYAPGEQGVIIGILNSGVHIIMYFYYMVAAMGPQYQKYL 199
            |||:|||||||||||.......|..:|:..|.|......:||.:|:|||.||.:.|.||..||||
  Rat   148 RKKNNQVSFLHVYHHCTMFTLWWIGIKWVAGGQAFFGAQMNSFIHVIMYSYYGLTAFGPWIQKYL 212

  Fly   200 WWKKYMTSIQLIQFVLILGYMLTVGAKGCNMPKTLTFFFVGNTVIFLYLFGNFYRKTYKK-AKSV 263
            |||:|:|.:||:||.:.:|:........|..||.:.:..:...:.|::||.|||.:||.: .||.
  Rat   213 WWKRYLTMLQLVQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYTRTYNEPKKSK 277

  Fly   264 DGGSRTTGSSLAQSALRAAGGMGCMPQTMNAGKHLLQNGQVGK 306
            .|.:.|.|.|        |.|:....:.:     :|:||:..|
  Rat   278 TGKTATNGIS--------ANGVNKSEKQL-----VLENGKPQK 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bondNP_651062.3 ELO 45..263 CDD:460083 84/233 (36%)
Elovl4NP_001178725.1 ELO 41..278 CDD:460083 92/252 (37%)

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