DRSC/TRiP Functional Genomics Resources

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Protein Alignment bond and Elovl3

DIOPT Version :10

Sequence 1:NP_651062.3 Gene:bond / 42657 FlyBaseID:FBgn0260942 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_001101072.1 Gene:Elovl3 / 309449 RGDID:1307263 Length:271 Species:Rattus norvegicus


Alignment Length:261 Identity:77/261 - (29%)
Similarity:126/261 - (48%) Gaps:49/261 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VDSWFLMSSPMPVVAVVLVYLAFVLKIGPEYMKNRKPMDLKRIMVFYNAFQVLYSI------WMC 81
            |.|:|          :|||||..:: .|..|||.||...|:|.::.::....::||      |..
  Rat    36 VSSFF----------IVLVYLLLII-FGQNYMKTRKGFSLQRPLILWSFCLAIFSILGTLRMWKF 89

  Fly    82 RTSIQESNVMASIFSKK--CEINRTREQNLTLYSGAWFYFFSKIIDLLDTTFFVLRKKDNQVSFL 144
            .     ..|:.::..|:  |..:.|.:..:..:|  |.:..||:::|.||.|.:|||:  .:.|:
  Rat    90 M-----GTVLFTMGLKQTVCFTDYTNDAIVKFWS--WVFLLSKVVELGDTAFIILRKR--PLIFV 145

  Fly   145 HVYHHTITVLF-SWGYLKYAPGEQGVIIGILNSGVHIIMYFYYMVAAMGPQYQKYLWWKKYMTSI 208
            |.|||:..:|| |:||....|  .|.....:|.|||.:||.||.:.|...::...|  ...:||:
  Rat   146 HWYHHSTVLLFTSFGYKNKVP--SGGWFMTMNLGVHSVMYTYYTMKAAKVKHPNIL--PMVITSL 206

  Fly   209 QLIQFVL-----ILGYMLTVGAKGCNMPKTLTFFFVGNTVI---FLYLFGNFYRKTY----KKAK 261
            |::|.||     ||.|:.. ..:||   .|.:..|..:.|:   :..||..|:.:.|    :||:
  Rat   207 QILQMVLGTIFGILNYIWR-QERGC---YTTSEHFFWSFVLYGTYFILFAQFFHRAYLRPKRKAE 267

  Fly   262 S 262
            |
  Rat   268 S 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bondNP_651062.3 ELO 45..263 CDD:460083 69/239 (29%)
Elovl3NP_001101072.1 ELO 30..266 CDD:460083 74/257 (29%)

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