DRSC/TRiP Functional Genomics Resources

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Protein Alignment bond and CG30008

DIOPT Version :10

Sequence 1:NP_651062.3 Gene:bond / 42657 FlyBaseID:FBgn0260942 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_724853.1 Gene:CG30008 / 246388 FlyBaseID:FBgn0050008 Length:266 Species:Drosophila melanogaster


Alignment Length:246 Identity:89/246 - (36%)
Similarity:134/246 - (54%) Gaps:21/246 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 DSWFLMSSPMPVVAVVLVYLAFVLKIGPEYMKNRKPMDLKRIMVFYNAFQVLYSIWMCRTSIQES 88
            |.|::       :.|:::||.||.|.||.:|:.|||.:|||:::.:|..||:..|:..:..:..:
  Fly    21 DPWYM-------ITVLVLYLYFVTKAGPHFMEWRKPYELKRLILLHNFIQVVSCIYAIKEVLYIT 78

  Fly    89 NVMASIFSKKCEINRTREQNLTLYSGAWFYFFSKIIDLLDTTFFVLRKKDNQVSFLHVYHHTITV 153
            :....||.|..:|..:.|.....|:.|:|.|:.||.:|::|..||||||.||||.||::||..||
  Fly    79 DNTIYIFWKCRDIGSSPELVRRYYNLAYFLFWLKISELIETVIFVLRKKQNQVSKLHIFHHFSTV 143

  Fly   154 LFSWGYLKY-APGEQGVIIGILNSGVHIIMYFYYMVAAMGPQ--YQKYLWWKKYMTSIQLIQFVL 215
            ...:..:.: ..|........|||.||:|||.||.|||:..:  .|.....||.:|.||:.||||
  Fly   144 TLVYALINFNENGSAAYFCVFLNSIVHVIMYSYYFVAAVADKTLVQALTPVKKCITVIQMTQFVL 208

  Fly   216 IL---GYMLTVGAKGCNMPKTLTFFFVGNTVI--FLYLFGNFYRKTYKKAK 261
            ||   .:.|.:    |.||..:..:|  .|||  ..|.|.:||...|:.::
  Fly   209 ILTQVAFQLVL----CGMPPLVLLYF--TTVILGMFYGFYDFYNSAYQASQ 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bondNP_651062.3 ELO 45..263 CDD:460083 84/225 (37%)
CG30008NP_724853.1 ELO 17..257 CDD:460083 89/246 (36%)

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