DRSC/TRiP Functional Genomics Resources

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Protein Alignment bond and elo-9

DIOPT Version :9

Sequence 1:NP_651062.3 Gene:bond / 42657 FlyBaseID:FBgn0260942 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_497086.1 Gene:elo-9 / 190207 WormBaseID:WBGene00001247 Length:286 Species:Caenorhabditis elegans


Alignment Length:243 Identity:69/243 - (28%)
Similarity:107/243 - (44%) Gaps:32/243 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 VYL--AFVL--KIGPEYMKNRKPMDLKRIMVFYNAFQVLYSI---WMCRTSIQESNVMASIFSKK 98
            |||  |:::  .:...||::|||..::.:::.:|.|..::||   |.......::..........
 Worm    53 VYLSAAYIIATNLLQRYMESRKPKSMRPLLLAWNGFLAVFSIMGTWRFGIEFYDAVFRRGFIDSI 117

  Fly    99 CEINRTREQNLTLYSGAWFYFF--SKIIDLLDTTFFVLRKKDNQVSFLHVYHHTITVLFSW--GY 159
            |.....|..     |..|...|  |||.:..||.|.||||:  .|.|||.|||.:.::.||  ..
 Worm   118 CLAVNPRSP-----SAFWACMFALSKIAEFGDTMFLVLRKR--PVIFLHWYHHAVVLILSWHAAI 175

  Fly   160 LKYAPGEQGVIIGILNSGVHIIMYFYYMVAAMGPQYQKYLWWKKYMTSIQLIQFVL------ILG 218
            ...|||...:.:..|   ||.|||.||.:.::|.:..|.:  ...:|.:|.:|.::      |:.
 Worm   176 ELTAPGRWFIFMNYL---VHSIMYTYYAITSIGYRLPKIV--SMTVTFLQTLQMLIGVSISCIVL 235

  Fly   219 YMLTVGAKGCNMPKTLTFFFVGNTVIFLYLFGNFYRKTY--KKAKSVD 264
            | |.:..:.|...........|....||.||.:|:...|  ||.|..|
 Worm   236 Y-LKLNGEMCQQSYDNLALSFGIYASFLVLFSSFFNNAYLVKKDKKPD 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bondNP_651062.3 ELO 27..262 CDD:279492 67/239 (28%)
elo-9NP_497086.1 ELO 44..274 CDD:279492 64/233 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3071
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2489
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.770

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