DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5326 and Elovl3

DIOPT Version :10

Sequence 1:NP_651060.1 Gene:CG5326 / 42655 FlyBaseID:FBgn0038983 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_001101072.1 Gene:Elovl3 / 309449 RGDID:1307263 Length:271 Species:Rattus norvegicus


Alignment Length:296 Identity:78/296 - (26%)
Similarity:130/296 - (43%) Gaps:61/296 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VDRMVNF-------------FVEHEDLR--TKQWFLSNAPGPLFMILGAYLYFCLYAGPRYMRDR 61
            :|..:||             |...:|||  .:::::|:     |.|:..||...:: |..||:.|
  Rat     1 MDTSMNFSRGLKTELIQPYDFEMSQDLRPFLEEYWVSS-----FFIVLVYLLLIIF-GQNYMKTR 59

  Fly    62 KPFELKNTLL-------VYNAVQVLLSW-----VLFYEGYKGGWGGHYNFKCQPV---TYESDPI 111
            |.|.|:..|:       :::.:..|..|     |||..|.|           |.|   .|.:|.|
  Rat    60 KGFSLQRPLILWSFCLAIFSILGTLRMWKFMGTVLFTMGLK-----------QTVCFTDYTNDAI 113

  Fly   112 SMRMARAVWLYYIAKITELLDTVFFVLRKKQRQISFLHLYHHTLMPVCAFIGVKYFAGGHGTLLG 176
            ....:   |::.::|:.||.||.|.:|||  |.:.|:|.|||:.:.:....|.|......|..: 
  Rat   114 VKFWS---WVFLLSKVVELGDTAFIILRK--RPLIFVHWYHHSTVLLFTSFGYKNKVPSGGWFM- 172

  Fly   177 FINSFIHIIMYAYYLLSAMGPKVQKYLWWKKYITILQIVQFLI--IFVHTLQIQFQPNCNFPKSI 239
            .:|..:|.:||.||.:.|...|....|  ...||.|||:|.::  ||.....|..|....:..|.
  Rat   173 TMNLGVHSVMYTYYTMKAAKVKHPNIL--PMVITSLQILQMVLGTIFGILNYIWRQERGCYTTSE 235

  Fly   240 AALLTFNA-GLFTYMFSAFYVANY---KKEAAAQAK 271
            ....:|.. |.:..:|:.|:...|   |::|.::::
  Rat   236 HFFWSFVLYGTYFILFAQFFHRAYLRPKRKAESKSQ 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5326NP_651060.1 ELO 30..262 CDD:460083 68/249 (27%)
Elovl3NP_001101072.1 ELO 30..266 CDD:460083 70/260 (27%)

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