DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5326 and elo-3

DIOPT Version :9

Sequence 1:NP_651060.1 Gene:CG5326 / 42655 FlyBaseID:FBgn0038983 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_001367447.1 Gene:elo-3 / 183948 WormBaseID:WBGene00001241 Length:320 Species:Caenorhabditis elegans


Alignment Length:287 Identity:75/287 - (26%)
Similarity:122/287 - (42%) Gaps:69/287 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ETTTIVDRMVNFFVEHEDLRTKQWFLSNAPGPLFMILGAYLYFC-LYAGPRYMRDRKPFELKNTL 70
            ||:....|...:...|       |:.|        |..:.:|.. ::.|.:.|...|||:|...|
 Worm    22 ETSFDAFRSTTWMQNH-------WYQS--------ITASVVYVAVIFTGKKIMEKYKPFQLDTPL 71

  Fly    71 LVYN---AVQVLLSWVLFYEGYKGGWGGHYN-FK--------CQPVTYESDPISMRMARAVWL-- 121
            .|:|   |:..:|.::.....:...|....| ||        .|.||            ..|.  
 Worm    72 FVWNSFLAIFSILGFLRMTPEFVWSWSAEGNSFKYSICHSSYAQGVT------------GFWTEQ 124

  Fly   122 YYIAKITELLDTVFFVLRKKQRQISFLHLYHHTLMPVCAFIGVK-YFAGGHGTLLGFINSFIHII 185
            :.::|:.||:||:|.||||  |.:.|||.|||..:.:..:...| :.|.|...:  ::|..:|.:
 Worm   125 FAMSKLFELIDTIFIVLRK--RPLIFLHWYHHVTVMIYTWHAYKDHTASGRWFI--WMNYGVHAL 185

  Fly   186 MYAYYLLSAMGPKVQKYLWWKKYITILQIVQF---LIIFVHTLQIQFQPN-CNFPKSIAALLTF- 245
            ||:||.|.::..::.|.:  ...:|.||:.|.   :||.|...:|:.... |.        .|: 
 Worm   186 MYSYYALRSLKFRLPKQM--AMVVTTLQLAQMVMGVIIGVTVYRIKSSGEYCQ--------QTWD 240

  Fly   246 NAGL-----FTY--MFSAFYVANYKKE 265
            |.||     |||  :|:.|:...|.|:
 Worm   241 NLGLCFGVYFTYFLLFANFFYHAYVKK 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5326NP_651060.1 ELO 31..262 CDD:395916 68/258 (26%)
elo-3NP_001367447.1 ELO 33..270 CDD:395916 72/276 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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