DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33093 and LBO1

DIOPT Version :10

Sequence 1:NP_788715.2 Gene:CG33093 / 42654 FlyBaseID:FBgn0053093 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_566685.1 Gene:LBO1 / 821696 AraportID:AT3G21420 Length:364 Species:Arabidopsis thaliana


Alignment Length:352 Identity:80/352 - (22%)
Similarity:139/352 - (39%) Gaps:82/352 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SETETLLLQNAVPIIDLENTIED-------VATNLREALSEKGYALLINHGISNEKIKKAWKYFD 60
            |..:|..|.:.:|:|||....:.       ....|.:|..:.|:..:|||||..|.::...:...
plant    44 SSLKTHHLHHQIPVIDLSKLSKPDNDDFFFEILKLSQACEDWGFFQVINHGIEVEVVEDIEEVAS 108

  Fly    61 GFVDLTDEVKLAFERSKAP------DGENHGYVSPGMERFDG--------RTPELRHAYNICKLQ 111
            .|.|:..|     |:.|.|      .|....::....::.|.        ..|::|:        
plant   109 EFFDMPLE-----EKKKYPMEPGTVQGYGQAFIFSEDQKLDWCNMFALGVHPPQIRN-------- 160

  Fly   112 DKFLP------EQQLPGFSRHINSLVDDFNELGRFILKALAISLDAPPSFFTDKHSFMLSDDRFN 170
            .|..|      .:.|.|:|:.|       .||.:.:||.:||||.             |.::||.
plant   161 PKLWPSKPARFSESLEGYSKEI-------RELCKRLLKYIAISLG-------------LKEERFE 205

  Fly   171 ------LTTLRMLFYPPVEDQDHGRSFIRCGAHADYCTFTLLAQDSEGGLEVKLRGSDKWERVGH 229
                  :..:||.:|||....|   ..:....|:|....|:|.|.....:.:::...:.|..|..
plant   206 EMFGEAVQAVRMNYYPPCSSPD---LVLGLSPHSDGSALTVLQQSKNSCVGLQILKDNTWVPVKP 267

  Fly   230 LPGALFINCGETMAIWTDQFYHALQHRVVIPDQVDIRHRGRHSIAYFCHPDNSALINPKDLNITT 294
            ||.||.||.|:|:.:.::..|.:::||.|..     |.:.|.:|..|..|:....|.|  ::...
plant   268 LPNALVINIGDTIEVLSNGKYKSVEHRAVTN-----REKERLTIVTFYAPNYEVEIEP--MSELV 325

  Fly   295 KQTTSDVIQNAYDITMALAKGAFAHHY 321
            ...|:.....:|:      .|.:::||
plant   326 DDETNPCKYRSYN------HGDYSYHY 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33093NP_788715.2 PcbC 13..294 CDD:442714 72/313 (23%)
LBO1NP_566685.1 PLN02758 1..362 CDD:215404 80/352 (23%)

Return to query results.
Submit another query.